Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb4Q91XZ6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Grk6-206ENSMUST00000224995 2971 ntBASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 AA386476-201ENSMUST00000098781 1665 ntBASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb4Q91XZ6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb4Q91XZ6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb4Q91XZ6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb4Q91XZ6 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.08■□□□□ 0.64
Pcdhb4Q91XZ6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb4Q91XZ6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb4Q91XZ6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb4Q91XZ6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb4Q91XZ6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb4Q91XZ6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb4Q91XZ6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb4Q91XZ6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhb4Q91XZ6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb4Q91XZ6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms