Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Pcdhb6Q91XZ4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb6Q91XZ4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.83■□□□□ 0.77
Pcdhb6Q91XZ4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Pcdhb6Q91XZ4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Gm43017-201ENSMUST00000198296 752 ntBASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb6Q91XZ4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Gm26833-201ENSMUST00000180899 440 ntBASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb6Q91XZ4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb6Q91XZ4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Gm27801-201ENSMUST00000184174 223 ntBASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb6Q91XZ4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb6Q91XZ4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb6Q91XZ4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb6Q91XZ4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb6Q91XZ4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms