Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhga9Q91XX9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhga9Q91XX9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhga9Q91XX9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhga9Q91XX9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga9Q91XX9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhga9Q91XX9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Pcdhga9Q91XX9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga9Q91XX9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga9Q91XX9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Gm42569-201ENSMUST00000200539 472 ntBASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms