Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgb1Q91XX8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Gm13234-201ENSMUST00000120010 747 ntBASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.07■□□□□ 0.8
Pcdhgb1Q91XX8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhgb1Q91XX8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.05■□□□□ 0.8
Pcdhgb1Q91XX8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb1Q91XX8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdhgb1Q91XX8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb1Q91XX8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhgb1Q91XX8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhgb1Q91XX8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhgb1Q91XX8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Pcdhgb1Q91XX8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhgb1Q91XX8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Pcdhgb1Q91XX8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhgb1Q91XX8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms