Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhgb4Q91XX6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Golph3-205ENSMUST00000228671 2842 ntBASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.37■□□□□ 0.85
Pcdhgb4Q91XX6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhgb4Q91XX6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhgb4Q91XX6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhgb4Q91XX6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Pcdhgb4Q91XX6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgb4Q91XX6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhgb4Q91XX6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Mir7075-201ENSMUST00000184187 82 ntBASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhgb4Q91XX6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhgb4Q91XX6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb4Q91XX6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms