Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vsx1Q91V10 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.11■□□□□ 0.65
Vsx1Q91V10 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vsx1Q91V10 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vsx1Q91V10 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.1■□□□□ 0.65
Vsx1Q91V10 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.1■□□□□ 0.65
Vsx1Q91V10 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vsx1Q91V10 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vsx1Q91V10 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vsx1Q91V10 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vsx1Q91V10 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Vsx1Q91V10 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.1■□□□□ 0.65
Vsx1Q91V10 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Gm6211-202ENSMUST00000167849 925 ntBASIC19.09■□□□□ 0.65
Vsx1Q91V10 Trmt13-210ENSMUST00000198454 880 ntBASIC19.09■□□□□ 0.65
Vsx1Q91V10 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vsx1Q91V10 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vsx1Q91V10 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Vsx1Q91V10 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Vsx1Q91V10 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.08■□□□□ 0.64
Vsx1Q91V10 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.08■□□□□ 0.64
Vsx1Q91V10 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.08■□□□□ 0.64
Vsx1Q91V10 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.08■□□□□ 0.64
Vsx1Q91V10 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.08■□□□□ 0.64
Vsx1Q91V10 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Vsx1Q91V10 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vsx1Q91V10 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vsx1Q91V10 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Vsx1Q91V10 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.08■□□□□ 0.64
Vsx1Q91V10 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vsx1Q91V10 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vsx1Q91V10 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Gm38205-201ENSMUST00000192243 258 ntBASIC19.06■□□□□ 0.64
Vsx1Q91V10 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vsx1Q91V10 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.06■□□□□ 0.64
Vsx1Q91V10 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vsx1Q91V10 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vsx1Q91V10 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vsx1Q91V10 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vsx1Q91V10 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.05■□□□□ 0.64
Vsx1Q91V10 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.05■□□□□ 0.64
Vsx1Q91V10 Gm13836-201ENSMUST00000121159 501 ntBASIC19.05■□□□□ 0.64
Vsx1Q91V10 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vsx1Q91V10 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vsx1Q91V10 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vsx1Q91V10 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vsx1Q91V10 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vsx1Q91V10 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vsx1Q91V10 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vsx1Q91V10 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vsx1Q91V10 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vsx1Q91V10 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vsx1Q91V10 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.02■□□□□ 0.64
Vsx1Q91V10 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.02■□□□□ 0.64
Vsx1Q91V10 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms