Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tram1Q91V04 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tram1Q91V04 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tram1Q91V04 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tram1Q91V04 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Tram1Q91V04 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.56■□□□□ 0.24
Tram1Q91V04 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Tram1Q91V04 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.56■□□□□ 0.24
Tram1Q91V04 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tram1Q91V04 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.55■□□□□ 0.24
Tram1Q91V04 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.55■□□□□ 0.24
Tram1Q91V04 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Tram1Q91V04 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Tram1Q91V04 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tram1Q91V04 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tram1Q91V04 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tram1Q91V04 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Tram1Q91V04 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Tram1Q91V04 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.54■□□□□ 0.24
Tram1Q91V04 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.54■□□□□ 0.24
Tram1Q91V04 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.54■□□□□ 0.24
Tram1Q91V04 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tram1Q91V04 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tram1Q91V04 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tram1Q91V04 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tram1Q91V04 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tram1Q91V04 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.53■□□□□ 0.24
Tram1Q91V04 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Tram1Q91V04 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tram1Q91V04 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.53■□□□□ 0.24
Tram1Q91V04 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.53■□□□□ 0.24
Tram1Q91V04 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tram1Q91V04 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tram1Q91V04 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tram1Q91V04 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tram1Q91V04 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.52■□□□□ 0.24
Tram1Q91V04 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tram1Q91V04 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tram1Q91V04 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.52■□□□□ 0.24
Tram1Q91V04 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tram1Q91V04 Gm45444-201ENSMUST00000211394 898 ntBASIC16.52■□□□□ 0.24
Tram1Q91V04 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Tram1Q91V04 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tram1Q91V04 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tram1Q91V04 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tram1Q91V04 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.52■□□□□ 0.23
Tram1Q91V04 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tram1Q91V04 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tram1Q91V04 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tram1Q91V04 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.51■□□□□ 0.23
Tram1Q91V04 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tram1Q91V04 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Tram1Q91V04 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tram1Q91V04 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.51■□□□□ 0.23
Tram1Q91V04 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.51■□□□□ 0.23
Tram1Q91V04 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tram1Q91V04 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tram1Q91V04 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tram1Q91V04 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms