Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cspg4Q8VHY0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cspg4Q8VHY0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cspg4Q8VHY0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cspg4Q8VHY0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 Dio3-201ENSMUST00000097228 1449 ntBASIC16.66■□□□□ 0.26
Cspg4Q8VHY0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Gm10231-201ENSMUST00000181584 441 ntBASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Gm10175-202ENSMUST00000208752 441 ntBASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Gm10517-202ENSMUST00000192970 758 ntBASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cspg4Q8VHY0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cspg4Q8VHY0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cspg4Q8VHY0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Rab3c-203ENSMUST00000224180 967 ntBASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cspg4Q8VHY0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cspg4Q8VHY0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms