Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.65■□□□□ 0.26
Gtf3aQ8VHT7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Gtf3aQ8VHT7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gtf3aQ8VHT7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Gm10033-202ENSMUST00000211874 928 ntBASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Gtf3aQ8VHT7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Gm7291-201ENSMUST00000199147 382 ntBASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Gtf3aQ8VHT7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gtf3aQ8VHT7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Gm29257-201ENSMUST00000186115 639 ntBASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Gtf3aQ8VHT7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Gm27405-201ENSMUST00000184201 112 ntBASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 AV356131-201ENSMUST00000206201 750 ntBASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gtf3aQ8VHT7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms