Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpa1Q8VEE4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Grk6-206ENSMUST00000224995 2971 ntBASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpa1Q8VEE4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpa1Q8VEE4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpa1Q8VEE4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 BC021767-201ENSMUST00000126387 1716 ntBASIC19.34■□□□□ 0.69
Rpa1Q8VEE4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpa1Q8VEE4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.33■□□□□ 0.68
Rpa1Q8VEE4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpa1Q8VEE4 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.33■□□□□ 0.68
Rpa1Q8VEE4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpa1Q8VEE4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpa1Q8VEE4 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.33■□□□□ 0.68
Rpa1Q8VEE4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpa1Q8VEE4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.31■□□□□ 0.68
Rpa1Q8VEE4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms