Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx39aQ8VDW0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Gm12933-201ENSMUST00000120203 872 ntBASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx39aQ8VDW0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx39aQ8VDW0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Gm13146-201ENSMUST00000118508 780 ntBASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx39aQ8VDW0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Ddx39aQ8VDW0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx39aQ8VDW0 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx39aQ8VDW0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Gm27011-201ENSMUST00000182352 972 ntBASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx39aQ8VDW0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Ddx39aQ8VDW0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ddx39aQ8VDW0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx39aQ8VDW0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx39aQ8VDW0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx39aQ8VDW0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.39■■□□□ 1.01
Ddx39aQ8VDW0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx39aQ8VDW0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Mir5133-201ENSMUST00000174955 77 ntBASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Gm6420-201ENSMUST00000193885 723 ntBASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ddx39aQ8VDW0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ddx39aQ8VDW0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms