Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubqln1Q8R317 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubqln1Q8R317 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubqln1Q8R317 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubqln1Q8R317 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubqln1Q8R317 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ubqln1Q8R317 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ubqln1Q8R317 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.22■□□□□ 0.51
Ubqln1Q8R317 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ubqln1Q8R317 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ubqln1Q8R317 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Gm11421-201ENSMUST00000122124 294 ntBASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ubqln1Q8R317 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubqln1Q8R317 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ubqln1Q8R317 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.18■□□□□ 0.5
Ubqln1Q8R317 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Gm26833-201ENSMUST00000180899 440 ntBASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Ubqln1Q8R317 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Gm43017-201ENSMUST00000198296 752 ntBASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubqln1Q8R317 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubqln1Q8R317 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ubqln1Q8R317 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ubqln1Q8R317 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms