Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zcchc9Q8R1J3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zcchc9Q8R1J3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zcchc9Q8R1J3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zcchc9Q8R1J3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
Zcchc9Q8R1J3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Zcchc9Q8R1J3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zcchc9Q8R1J3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zcchc9Q8R1J3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Zcchc9Q8R1J3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Zcchc9Q8R1J3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.14■□□□□ 0.65
Zcchc9Q8R1J3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zcchc9Q8R1J3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Zcchc9Q8R1J3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zcchc9Q8R1J3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zcchc9Q8R1J3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zcchc9Q8R1J3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zcchc9Q8R1J3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms