Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 Gm45244-201ENSMUST00000211328 2200 ntBASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC22.3■■□□□ 1.16
Pdlim2Q8R1G6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Pdlim2Q8R1G6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC22.28■■□□□ 1.16
Pdlim2Q8R1G6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim2Q8R1G6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim2Q8R1G6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pdlim2Q8R1G6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.27■■□□□ 1.16
Pdlim2Q8R1G6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim2Q8R1G6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim2Q8R1G6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pdlim2Q8R1G6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim2Q8R1G6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim2Q8R1G6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim2Q8R1G6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.23■■□□□ 1.15
Pdlim2Q8R1G6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim2Q8R1G6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms