Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp40Q8R1F9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rpp40Q8R1F9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp40Q8R1F9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rpp40Q8R1F9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp40Q8R1F9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Gm13234-201ENSMUST00000120010 747 ntBASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp40Q8R1F9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Gm10849-201ENSMUST00000100397 618 ntBASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Gm38205-201ENSMUST00000192243 258 ntBASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp40Q8R1F9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp40Q8R1F9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Gm42569-201ENSMUST00000200539 472 ntBASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp40Q8R1F9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp40Q8R1F9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 AV356131-201ENSMUST00000206201 750 ntBASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp40Q8R1F9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Gm7860-201ENSMUST00000121190 879 ntBASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.66■□□□□ 0.9
Rpp40Q8R1F9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms