Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28aQ8K3Y3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28aQ8K3Y3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28aQ8K3Y3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28aQ8K3Y3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28aQ8K3Y3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Lin28aQ8K3Y3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.01■□□□□ 0.47
Lin28aQ8K3Y3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28aQ8K3Y3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 Gm7291-201ENSMUST00000199147 382 ntBASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28aQ8K3Y3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 AV356131-201ENSMUST00000206201 750 ntBASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
Lin28aQ8K3Y3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Gm13234-201ENSMUST00000120010 747 ntBASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lin28aQ8K3Y3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Gm27405-201ENSMUST00000184201 112 ntBASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Lin28aQ8K3Y3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lin28aQ8K3Y3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lin28aQ8K3Y3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lin28aQ8K3Y3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lin28aQ8K3Y3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lin28aQ8K3Y3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.95■□□□□ 0.46
Lin28aQ8K3Y3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms