Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.85■□□□□ 0.93
Trim68Q8K243 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim68Q8K243 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Mir5133-201ENSMUST00000174955 77 ntBASIC20.84■□□□□ 0.93
Trim68Q8K243 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim68Q8K243 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim68Q8K243 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim68Q8K243 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim68Q8K243 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim68Q8K243 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim68Q8K243 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Trim68Q8K243 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
Trim68Q8K243 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.83■□□□□ 0.93
Trim68Q8K243 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim68Q8K243 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim68Q8K243 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim68Q8K243 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim68Q8K243 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.82■□□□□ 0.92
Trim68Q8K243 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.82■□□□□ 0.92
Trim68Q8K243 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim68Q8K243 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim68Q8K243 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trim68Q8K243 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim68Q8K243 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.81■□□□□ 0.92
Trim68Q8K243 Gm22240-201ENSMUST00000175225 82 ntBASIC20.81■□□□□ 0.92
Trim68Q8K243 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.81■□□□□ 0.92
Trim68Q8K243 Gm10252-201ENSMUST00000209541 832 ntBASIC20.81■□□□□ 0.92
Trim68Q8K243 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Trim68Q8K243 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim68Q8K243 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim68Q8K243 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim68Q8K243 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim68Q8K243 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim68Q8K243 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim68Q8K243 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim68Q8K243 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim68Q8K243 Gm27801-201ENSMUST00000184174 223 ntBASIC20.79■□□□□ 0.92
Trim68Q8K243 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim68Q8K243 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim68Q8K243 Gm4968-201ENSMUST00000071458 858 ntBASIC20.79■□□□□ 0.92
Trim68Q8K243 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim68Q8K243 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim68Q8K243 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim68Q8K243 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim68Q8K243 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim68Q8K243 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim68Q8K243 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim68Q8K243 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim68Q8K243 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim68Q8K243 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim68Q8K243 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim68Q8K243 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim68Q8K243 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trim68Q8K243 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim68Q8K243 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim68Q8K243 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim68Q8K243 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim68Q8K243 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim68Q8K243 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim68Q8K243 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Trim68Q8K243 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim68Q8K243 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim68Q8K243 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim68Q8K243 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim68Q8K243 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim68Q8K243 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim68Q8K243 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Trim68Q8K243 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim68Q8K243 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms