Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfwd3Q8CIK8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfwd3Q8CIK8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfwd3Q8CIK8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rfwd3Q8CIK8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfwd3Q8CIK8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfwd3Q8CIK8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfwd3Q8CIK8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfwd3Q8CIK8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rfwd3Q8CIK8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rfwd3Q8CIK8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfwd3Q8CIK8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms