Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rdh1Q8CGV4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rdh1Q8CGV4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Gm13146-201ENSMUST00000118508 780 ntBASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rdh1Q8CGV4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rdh1Q8CGV4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rdh1Q8CGV4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rdh1Q8CGV4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rdh1Q8CGV4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Gm7860-201ENSMUST00000121190 879 ntBASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rdh1Q8CGV4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.75■□□□□ 0.59
Rdh1Q8CGV4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rdh1Q8CGV4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rdh1Q8CGV4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rdh1Q8CGV4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rdh1Q8CGV4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rdh1Q8CGV4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rdh1Q8CGV4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms