Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calcoco1Q8CGU1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Gm9847-201ENSMUST00000052528 599 ntBASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Calcoco1Q8CGU1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Calcoco1Q8CGU1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Calcoco1Q8CGU1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Calcoco1Q8CGU1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Calcoco1Q8CGU1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Gm12922-201ENSMUST00000120626 809 ntBASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Gm13241-201ENSMUST00000094493 780 ntBASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Calcoco1Q8CGU1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Calcoco1Q8CGU1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.92■□□□□ 0.78
Calcoco1Q8CGU1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calcoco1Q8CGU1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Calcoco1Q8CGU1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calcoco1Q8CGU1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Calcoco1Q8CGU1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms