Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShfQ8CG80 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ShfQ8CG80 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.2■□□□□ 0.34
ShfQ8CG80 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ShfQ8CG80 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.2■□□□□ 0.34
ShfQ8CG80 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.2■□□□□ 0.34
ShfQ8CG80 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Golgb1-201ENSMUST00000023534 498 ntBASIC17.2■□□□□ 0.34
ShfQ8CG80 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.2■□□□□ 0.34
ShfQ8CG80 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShfQ8CG80 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ShfQ8CG80 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShfQ8CG80 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShfQ8CG80 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShfQ8CG80 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShfQ8CG80 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShfQ8CG80 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShfQ8CG80 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShfQ8CG80 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.18■□□□□ 0.34
ShfQ8CG80 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ShfQ8CG80 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ShfQ8CG80 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShfQ8CG80 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ShfQ8CG80 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.16■□□□□ 0.34
ShfQ8CG80 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.16■□□□□ 0.34
ShfQ8CG80 Gm12922-201ENSMUST00000120626 809 ntBASIC17.16■□□□□ 0.34
ShfQ8CG80 Gm14117-201ENSMUST00000122417 843 ntBASIC17.16■□□□□ 0.34
ShfQ8CG80 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ShfQ8CG80 Rps24-207ENSMUST00000224568 714 ntBASIC17.16■□□□□ 0.34
ShfQ8CG80 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShfQ8CG80 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ShfQ8CG80 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ShfQ8CG80 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShfQ8CG80 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.14■□□□□ 0.33
ShfQ8CG80 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShfQ8CG80 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ShfQ8CG80 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ShfQ8CG80 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms