Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb7Q8CDY9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb7Q8CDY9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb7Q8CDY9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb7Q8CDY9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb7Q8CDY9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb7Q8CDY9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhb7Q8CDY9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb7Q8CDY9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb7Q8CDY9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb7Q8CDY9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb7Q8CDY9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb7Q8CDY9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb7Q8CDY9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb7Q8CDY9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms