Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.37■□□□□ 0.05
Gm4894Q8CA09 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Gm4894Q8CA09 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm4894Q8CA09 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm4894Q8CA09 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm4894Q8CA09 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Gm4894Q8CA09 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm4894Q8CA09 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm4894Q8CA09 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms