Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm9949Q8C9F4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Smad6-203ENSMUST00000179458 273 ntBASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm9949Q8C9F4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm9949Q8C9F4 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.21■□□□□ 0.02
Gm9949Q8C9F4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Gm43017-201ENSMUST00000198296 752 ntBASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm9949Q8C9F4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm9949Q8C9F4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Gm40848-201ENSMUST00000221998 324 ntBASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Gm9949Q8C9F4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm9949Q8C9F4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Gm11421-201ENSMUST00000122124 294 ntBASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm9949Q8C9F4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms