Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cwc22Q8C5N3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Cwc22Q8C5N3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC26.7■■□□□ 1.86
Cwc22Q8C5N3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cwc22Q8C5N3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cwc22Q8C5N3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cwc22Q8C5N3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cwc22Q8C5N3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cwc22Q8C5N3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cwc22Q8C5N3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cwc22Q8C5N3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cwc22Q8C5N3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cwc22Q8C5N3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cwc22Q8C5N3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Cwc22Q8C5N3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Cwc22Q8C5N3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Cwc22Q8C5N3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
Cwc22Q8C5N3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cwc22Q8C5N3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Golph3-202ENSMUST00000226517 2359 ntBASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Gm7860-201ENSMUST00000121190 879 ntBASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Hsf1-204ENSMUST00000226872 2104 ntBASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC26.63■■□□□ 1.85
Cwc22Q8C5N3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Gm18284-201ENSMUST00000172604 624 ntBASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 AC124603.1-201ENSMUST00000223843 308 ntBASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cwc22Q8C5N3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cwc22Q8C5N3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cwc22Q8C5N3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Cwc22Q8C5N3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cwc22Q8C5N3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Cwc22Q8C5N3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cwc22Q8C5N3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cwc22Q8C5N3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC26.59■■□□□ 1.85
Cwc22Q8C5N3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Cwc22Q8C5N3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC26.59■■□□□ 1.85
Cwc22Q8C5N3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.59■■□□□ 1.85
Cwc22Q8C5N3 Gm9988-201ENSMUST00000069786 435 ntBASIC26.59■■□□□ 1.85
Cwc22Q8C5N3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms