Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.66■■□□□ 1.54
Ccdc60Q8C4J0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc60Q8C4J0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
Ccdc60Q8C4J0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc60Q8C4J0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc60Q8C4J0 Hsf1-204ENSMUST00000226872 2104 ntBASIC24.65■■□□□ 1.54
Ccdc60Q8C4J0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc60Q8C4J0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc60Q8C4J0 Gm43545-201ENSMUST00000196765 2779 ntBASIC24.65■■□□□ 1.54
Ccdc60Q8C4J0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc60Q8C4J0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc60Q8C4J0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc60Q8C4J0 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.64■■□□□ 1.54
Ccdc60Q8C4J0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC24.64■■□□□ 1.54
Ccdc60Q8C4J0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC24.64■■□□□ 1.54
Ccdc60Q8C4J0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc60Q8C4J0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc60Q8C4J0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Ccdc60Q8C4J0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc60Q8C4J0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc60Q8C4J0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Ccdc60Q8C4J0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.62■■□□□ 1.53
Ccdc60Q8C4J0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.62■■□□□ 1.53
Ccdc60Q8C4J0 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.62■■□□□ 1.53
Ccdc60Q8C4J0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ccdc60Q8C4J0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ccdc60Q8C4J0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Gm45640-201ENSMUST00000210665 1896 ntBASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc60Q8C4J0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc60Q8C4J0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC24.58■■□□□ 1.53
Ccdc60Q8C4J0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Ccdc60Q8C4J0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ccdc60Q8C4J0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ccdc60Q8C4J0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.57■■□□□ 1.52
Ccdc60Q8C4J0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
Ccdc60Q8C4J0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ccdc60Q8C4J0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc60Q8C4J0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Ccdc60Q8C4J0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ccdc60Q8C4J0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC24.55■■□□□ 1.52
Ccdc60Q8C4J0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms