Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cps1Q8C196 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cps1Q8C196 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cps1Q8C196 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cps1Q8C196 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC26.43■■□□□ 1.82
Cps1Q8C196 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Cps1Q8C196 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cps1Q8C196 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.43■■□□□ 1.82
Cps1Q8C196 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Cps1Q8C196 AC158538.1-201ENSMUST00000225870 294 ntBASIC26.43■■□□□ 1.82
Cps1Q8C196 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cps1Q8C196 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cps1Q8C196 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC26.42■■□□□ 1.82
Cps1Q8C196 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cps1Q8C196 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Cps1Q8C196 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC26.41■■□□□ 1.82
Cps1Q8C196 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Cps1Q8C196 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.41■■□□□ 1.82
Cps1Q8C196 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cps1Q8C196 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
Cps1Q8C196 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC26.4■■□□□ 1.82
Cps1Q8C196 Dio3-201ENSMUST00000097228 1449 ntBASIC26.4■■□□□ 1.82
Cps1Q8C196 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cps1Q8C196 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cps1Q8C196 Gm5643-201ENSMUST00000117081 966 ntBASIC26.39■■□□□ 1.82
Cps1Q8C196 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cps1Q8C196 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
Cps1Q8C196 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cps1Q8C196 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC26.39■■□□□ 1.81
Cps1Q8C196 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cps1Q8C196 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cps1Q8C196 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cps1Q8C196 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cps1Q8C196 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cps1Q8C196 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cps1Q8C196 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cps1Q8C196 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cps1Q8C196 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Cps1Q8C196 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Cps1Q8C196 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cps1Q8C196 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 AC152827.1-201ENSMUST00000221143 2189 ntBASIC26.36■■□□□ 1.81
Cps1Q8C196 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC26.36■■□□□ 1.81
Cps1Q8C196 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cps1Q8C196 Gm21596-201ENSMUST00000178049 1316 ntBASIC26.36■■□□□ 1.81
Cps1Q8C196 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC26.35■■□□□ 1.81
Cps1Q8C196 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cps1Q8C196 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cps1Q8C196 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
Cps1Q8C196 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC26.34■■□□□ 1.81
Cps1Q8C196 Gm2559-201ENSMUST00000201323 363 ntBASIC26.34■■□□□ 1.81
Cps1Q8C196 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cps1Q8C196 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC26.33■■□□□ 1.81
Cps1Q8C196 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC26.33■■□□□ 1.81
Cps1Q8C196 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cps1Q8C196 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cps1Q8C196 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cps1Q8C196 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Cps1Q8C196 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cps1Q8C196 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cps1Q8C196 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC26.32■■□□□ 1.8
Cps1Q8C196 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cps1Q8C196 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cps1Q8C196 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cps1Q8C196 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC26.31■■□□□ 1.8
Cps1Q8C196 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cps1Q8C196 Gm7977-201ENSMUST00000193787 748 ntBASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms