Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim35Q8C006 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim35Q8C006 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim35Q8C006 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim35Q8C006 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Trim35Q8C006 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim35Q8C006 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim35Q8C006 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim35Q8C006 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.57■□□□□ 0.72
Trim35Q8C006 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim35Q8C006 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim35Q8C006 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim35Q8C006 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.56■□□□□ 0.72
Trim35Q8C006 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim35Q8C006 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.56■□□□□ 0.72
Trim35Q8C006 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim35Q8C006 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.56■□□□□ 0.72
Trim35Q8C006 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC19.56■□□□□ 0.72
Trim35Q8C006 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim35Q8C006 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim35Q8C006 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim35Q8C006 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim35Q8C006 AC154828.2-201ENSMUST00000220908 1070 ntBASIC19.55■□□□□ 0.72
Trim35Q8C006 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.55■□□□□ 0.72
Trim35Q8C006 Gm6139-201ENSMUST00000079261 882 ntBASIC19.55■□□□□ 0.72
Trim35Q8C006 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim35Q8C006 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim35Q8C006 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim35Q8C006 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trim35Q8C006 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim35Q8C006 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Trim35Q8C006 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim35Q8C006 Serp2-204ENSMUST00000228055 705 ntBASIC19.54■□□□□ 0.72
Trim35Q8C006 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim35Q8C006 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim35Q8C006 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
Trim35Q8C006 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim35Q8C006 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
Trim35Q8C006 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim35Q8C006 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim35Q8C006 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim35Q8C006 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim35Q8C006 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim35Q8C006 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Trim35Q8C006 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim35Q8C006 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC19.52■□□□□ 0.72
Trim35Q8C006 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim35Q8C006 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.52■□□□□ 0.72
Trim35Q8C006 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim35Q8C006 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim35Q8C006 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim35Q8C006 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim35Q8C006 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim35Q8C006 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trim35Q8C006 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim35Q8C006 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Trim35Q8C006 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim35Q8C006 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim35Q8C006 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim35Q8C006 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Mir7075-201ENSMUST00000184187 82 ntBASIC19.51■□□□□ 0.71
Trim35Q8C006 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim35Q8C006 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.51■□□□□ 0.71
Trim35Q8C006 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim35Q8C006 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms