Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh3rf2Q8BZT2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh3rf2Q8BZT2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sh3rf2Q8BZT2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sh3rf2Q8BZT2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf2Q8BZT2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf2Q8BZT2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf2Q8BZT2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf2Q8BZT2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sh3rf2Q8BZT2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh3rf2Q8BZT2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 Mir5133-201ENSMUST00000174955 77 ntBASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh3rf2Q8BZT2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sh3rf2Q8BZT2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 Gm13534-201ENSMUST00000121169 513 ntBASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sh3rf2Q8BZT2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Gm27011-201ENSMUST00000182352 972 ntBASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sh3rf2Q8BZT2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms