Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chd9Q8BYH8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd9Q8BYH8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd9Q8BYH8 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd9Q8BYH8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd9Q8BYH8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd9Q8BYH8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd9Q8BYH8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd9Q8BYH8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Gm9103-201ENSMUST00000119371 405 ntBASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd9Q8BYH8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Gm13534-201ENSMUST00000121169 513 ntBASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Gm33142-201ENSMUST00000193913 867 ntBASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd9Q8BYH8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Gm12896-201ENSMUST00000118430 226 ntBASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.31■□□□□ 0.04
Chd9Q8BYH8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd9Q8BYH8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Gm13146-201ENSMUST00000118508 780 ntBASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms