Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Slc44a2Q8BY89 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Slc44a2Q8BY89 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc44a2Q8BY89 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc44a2Q8BY89 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc44a2Q8BY89 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a2Q8BY89 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Gm22238-201ENSMUST00000175222 88 ntBASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a2Q8BY89 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a2Q8BY89 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a2Q8BY89 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a2Q8BY89 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Slc44a2Q8BY89 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a2Q8BY89 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a2Q8BY89 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a2Q8BY89 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a2Q8BY89 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a2Q8BY89 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a2Q8BY89 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Gm7143-201ENSMUST00000222811 859 ntBASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc44a2Q8BY89 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc44a2Q8BY89 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc44a2Q8BY89 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms