Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ube3dQ8BX13 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Gm18284-201ENSMUST00000172604 624 ntBASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Gm26833-201ENSMUST00000180899 440 ntBASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ube3dQ8BX13 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Mir6236-201ENSMUST00000184437 123 ntBASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ube3dQ8BX13 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Gm8495-201ENSMUST00000188740 694 ntBASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ube3dQ8BX13 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ube3dQ8BX13 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ube3dQ8BX13 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3dQ8BX13 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3dQ8BX13 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Ube3dQ8BX13 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3dQ8BX13 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ube3dQ8BX13 Golph3-205ENSMUST00000228671 2842 ntBASIC17.02■□□□□ 0.31
Ube3dQ8BX13 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ube3dQ8BX13 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ube3dQ8BX13 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ube3dQ8BX13 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17■□□□□ 0.31
Ube3dQ8BX13 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Ube3dQ8BX13 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17■□□□□ 0.31
Ube3dQ8BX13 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms