Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fam43aQ8BUP8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.31■■□□□ 1
Fam43aQ8BUP8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Fam43aQ8BUP8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.3■■□□□ 1
Fam43aQ8BUP8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.3■■□□□ 1
Fam43aQ8BUP8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Fam43aQ8BUP8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Fam43aQ8BUP8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam43aQ8BUP8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam43aQ8BUP8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Golgb1-201ENSMUST00000023534 498 ntBASIC21.27■■□□□ 1
Fam43aQ8BUP8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Fam43aQ8BUP8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Fam43aQ8BUP8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Fam43aQ8BUP8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Fam43aQ8BUP8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam43aQ8BUP8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fam43aQ8BUP8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam43aQ8BUP8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam43aQ8BUP8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Gm9847-201ENSMUST00000052528 599 ntBASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam43aQ8BUP8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam43aQ8BUP8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Fam43aQ8BUP8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam43aQ8BUP8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam43aQ8BUP8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms