Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp43Q8BUM9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Usp43Q8BUM9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Usp43Q8BUM9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp43Q8BUM9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp43Q8BUM9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.54■□□□□ 0.72
Usp43Q8BUM9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp43Q8BUM9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp43Q8BUM9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.53■□□□□ 0.72
Usp43Q8BUM9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp43Q8BUM9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Usp43Q8BUM9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp43Q8BUM9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp43Q8BUM9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp43Q8BUM9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp43Q8BUM9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms