Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdk5rap1Q8BTW8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap1Q8BTW8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap1Q8BTW8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap1Q8BTW8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm38205-201ENSMUST00000192243 258 ntBASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdk5rap1Q8BTW8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Gm13146-201ENSMUST00000118508 780 ntBASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cdk5rap1Q8BTW8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdk5rap1Q8BTW8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdk5rap1Q8BTW8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdk5rap1Q8BTW8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.27■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
Cdk5rap1Q8BTW8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap1Q8BTW8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.26■□□□□ 0.51
Cdk5rap1Q8BTW8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdk5rap1Q8BTW8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdk5rap1Q8BTW8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdk5rap1Q8BTW8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.25■□□□□ 0.51
Cdk5rap1Q8BTW8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.24■□□□□ 0.51
Cdk5rap1Q8BTW8 Gm12933-201ENSMUST00000120203 872 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms