Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nup54Q8BTS4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Reep4-203ENSMUST00000226563 1444 ntBASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Nup54Q8BTS4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup54Q8BTS4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Nup54Q8BTS4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nup54Q8BTS4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Gm13234-201ENSMUST00000120010 747 ntBASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.76■□□□□ 0.75
Nup54Q8BTS4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup54Q8BTS4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup54Q8BTS4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup54Q8BTS4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.74■□□□□ 0.75
Nup54Q8BTS4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Gm26571-201ENSMUST00000181399 666 ntBASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup54Q8BTS4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Gm38205-201ENSMUST00000192243 258 ntBASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.72■□□□□ 0.75
Nup54Q8BTS4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms