Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scfd1Q8BRF7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Scfd1Q8BRF7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scfd1Q8BRF7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scfd1Q8BRF7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Scfd1Q8BRF7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.11■■□□□ 1.13
Scfd1Q8BRF7 Nespas-201ENSMUST00000143738 1083 ntBASIC22.11■■□□□ 1.13
Scfd1Q8BRF7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Scfd1Q8BRF7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scfd1Q8BRF7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scfd1Q8BRF7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Gm7290-201ENSMUST00000104990 617 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Gm12918-201ENSMUST00000120234 636 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Gm15710-201ENSMUST00000121821 636 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Gm5075-201ENSMUST00000196916 622 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Scfd1Q8BRF7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Gm6365-201ENSMUST00000054711 744 ntBASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Scfd1Q8BRF7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC22.08■■□□□ 1.13
Scfd1Q8BRF7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Scfd1Q8BRF7 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.08■■□□□ 1.12
Scfd1Q8BRF7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Scfd1Q8BRF7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.12
Scfd1Q8BRF7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Scfd1Q8BRF7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scfd1Q8BRF7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms