Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smco3Q8BQM7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.86■□□□□ 0.13
Smco3Q8BQM7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smco3Q8BQM7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smco3Q8BQM7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.83■□□□□ 0.12
Smco3Q8BQM7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smco3Q8BQM7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Gm11175-201ENSMUST00000116172 543 ntBASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smco3Q8BQM7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms