Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8BP99 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8BP99 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.93■□□□□ 0.62
Q8BP99 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q8BP99 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Q8BP99 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q8BP99 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.92■□□□□ 0.62
Q8BP99 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Q8BP99 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Q8BP99 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q8BP99 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Q8BP99 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Q8BP99 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Q8BP99 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.91■□□□□ 0.62
Q8BP99 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.91■□□□□ 0.62
Q8BP99 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q8BP99 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Q8BP99 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.9■□□□□ 0.62
Q8BP99 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q8BP99 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q8BP99 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q8BP99 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q8BP99 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q8BP99 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q8BP99 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8BP99 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.89■□□□□ 0.61
Q8BP99 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Q8BP99 Gm43137-201ENSMUST00000198052 594 ntBASIC18.89■□□□□ 0.61
Q8BP99 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8BP99 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.89■□□□□ 0.61
Q8BP99 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q8BP99 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.89■□□□□ 0.61
Q8BP99 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q8BP99 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8BP99 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Q8BP99 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q8BP99 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.88■□□□□ 0.61
Q8BP99 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q8BP99 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q8BP99 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Q8BP99 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.88■□□□□ 0.61
Q8BP99 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q8BP99 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Q8BP99 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Q8BP99 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q8BP99 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8BP99 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q8BP99 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Q8BP99 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8BP99 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q8BP99 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Q8BP99 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q8BP99 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q8BP99 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Q8BP99 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Q8BP99 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8BP99 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8BP99 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8BP99 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q8BP99 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Q8BP99 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.85■□□□□ 0.61
Q8BP99 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Q8BP99 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Q8BP99 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8BP99 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q8BP99 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8BP99 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8BP99 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Q8BP99 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8BP99 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Q8BP99 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q8BP99 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms