Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VmacQ8BP01 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VmacQ8BP01 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
VmacQ8BP01 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VmacQ8BP01 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
VmacQ8BP01 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.29■■□□□ 1.16
VmacQ8BP01 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
VmacQ8BP01 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.29■■□□□ 1.16
VmacQ8BP01 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
VmacQ8BP01 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VmacQ8BP01 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
VmacQ8BP01 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
VmacQ8BP01 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.28■■□□□ 1.16
VmacQ8BP01 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VmacQ8BP01 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.28■■□□□ 1.16
VmacQ8BP01 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
VmacQ8BP01 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
VmacQ8BP01 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VmacQ8BP01 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
VmacQ8BP01 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
VmacQ8BP01 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
VmacQ8BP01 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VmacQ8BP01 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.26■■□□□ 1.15
VmacQ8BP01 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
VmacQ8BP01 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
VmacQ8BP01 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.25■■□□□ 1.15
VmacQ8BP01 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VmacQ8BP01 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VmacQ8BP01 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.25■■□□□ 1.15
VmacQ8BP01 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
VmacQ8BP01 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VmacQ8BP01 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VmacQ8BP01 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VmacQ8BP01 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.24■■□□□ 1.15
VmacQ8BP01 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VmacQ8BP01 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.23■■□□□ 1.15
VmacQ8BP01 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.23■■□□□ 1.15
VmacQ8BP01 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.23■■□□□ 1.15
VmacQ8BP01 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VmacQ8BP01 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.22■■□□□ 1.15
VmacQ8BP01 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VmacQ8BP01 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
VmacQ8BP01 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
VmacQ8BP01 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VmacQ8BP01 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VmacQ8BP01 Gm7860-201ENSMUST00000121190 879 ntBASIC22.22■■□□□ 1.15
VmacQ8BP01 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VmacQ8BP01 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
VmacQ8BP01 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VmacQ8BP01 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VmacQ8BP01 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VmacQ8BP01 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VmacQ8BP01 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
VmacQ8BP01 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
VmacQ8BP01 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
VmacQ8BP01 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
VmacQ8BP01 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
VmacQ8BP01 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VmacQ8BP01 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
VmacQ8BP01 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VmacQ8BP01 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VmacQ8BP01 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
VmacQ8BP01 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
VmacQ8BP01 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
VmacQ8BP01 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
VmacQ8BP01 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VmacQ8BP01 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.19■■□□□ 1.14
VmacQ8BP01 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VmacQ8BP01 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
VmacQ8BP01 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VmacQ8BP01 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms