Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col16a1Q8BLX7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Col16a1Q8BLX7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
Col16a1Q8BLX7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Col16a1Q8BLX7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Col16a1Q8BLX7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
Col16a1Q8BLX7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col16a1Q8BLX7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col16a1Q8BLX7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Col16a1Q8BLX7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC25.74■■□□□ 1.71
Col16a1Q8BLX7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.74■■□□□ 1.71
Col16a1Q8BLX7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Gm27032-201ENSMUST00000183124 1116 ntBASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Col16a1Q8BLX7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Col16a1Q8BLX7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Col16a1Q8BLX7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Col16a1Q8BLX7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col16a1Q8BLX7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col16a1Q8BLX7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Col16a1Q8BLX7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
Col16a1Q8BLX7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Col16a1Q8BLX7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Col16a1Q8BLX7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Col16a1Q8BLX7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Col16a1Q8BLX7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Col16a1Q8BLX7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Col16a1Q8BLX7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC25.67■■□□□ 1.7
Col16a1Q8BLX7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Gm5643-201ENSMUST00000117081 966 ntBASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Gm29994-201ENSMUST00000195495 1193 ntBASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Col16a1Q8BLX7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Col16a1Q8BLX7 Gm13836-201ENSMUST00000121159 501 ntBASIC25.65■■□□□ 1.7
Col16a1Q8BLX7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col16a1Q8BLX7 Gm12896-201ENSMUST00000118430 226 ntBASIC25.65■■□□□ 1.7
Col16a1Q8BLX7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Col16a1Q8BLX7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Col16a1Q8BLX7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Col16a1Q8BLX7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Col16a1Q8BLX7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Col16a1Q8BLX7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Col16a1Q8BLX7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC25.64■■□□□ 1.69
Col16a1Q8BLX7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Col16a1Q8BLX7 Gm6802-201ENSMUST00000167843 1983 ntBASIC25.63■■□□□ 1.69
Col16a1Q8BLX7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC25.63■■□□□ 1.69
Col16a1Q8BLX7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms