Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdkl3Q8BLF2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Gm11175-201ENSMUST00000116172 543 ntBASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdkl3Q8BLF2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdkl3Q8BLF2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Cdkl3Q8BLF2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cdkl3Q8BLF2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdkl3Q8BLF2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdkl3Q8BLF2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdkl3Q8BLF2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdkl3Q8BLF2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Gm14523-201ENSMUST00000117260 558 ntBASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Gm27502-201ENSMUST00000183495 199 ntBASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdkl3Q8BLF2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms