Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarcal1Q8BJL0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Gm7860-201ENSMUST00000121190 879 ntBASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcal1Q8BJL0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smarcal1Q8BJL0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Gm20049-201ENSMUST00000219950 730 ntBASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcal1Q8BJL0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcal1Q8BJL0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Smarcal1Q8BJL0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcal1Q8BJL0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smarcal1Q8BJL0 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.54■□□□□ 0.88
Smarcal1Q8BJL0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcal1Q8BJL0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcal1Q8BJL0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
Smarcal1Q8BJL0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcal1Q8BJL0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms