Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf38Q8BI21 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf38Q8BI21 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf38Q8BI21 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf38Q8BI21 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf38Q8BI21 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf38Q8BI21 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf38Q8BI21 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf38Q8BI21 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.53■□□□□ 0.56
Rnf38Q8BI21 BC021767-201ENSMUST00000126387 1716 ntBASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.53■□□□□ 0.56
Rnf38Q8BI21 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf38Q8BI21 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Gm12922-201ENSMUST00000120626 809 ntBASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rnf38Q8BI21 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.52■□□□□ 0.56
Rnf38Q8BI21 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf38Q8BI21 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf38Q8BI21 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf38Q8BI21 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.52■□□□□ 0.55
Rnf38Q8BI21 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf38Q8BI21 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf38Q8BI21 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf38Q8BI21 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms