Protein–RNA interactions for Protein: Q8BGM5

Best2, Bestrophin-2, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best2Q8BGM5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Best2Q8BGM5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best2Q8BGM5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best2Q8BGM5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Best2Q8BGM5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Best2Q8BGM5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Best2Q8BGM5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.04■□□□□ 0.8
Best2Q8BGM5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Best2Q8BGM5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Best2Q8BGM5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Best2Q8BGM5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.03■□□□□ 0.8
Best2Q8BGM5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Best2Q8BGM5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Best2Q8BGM5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Best2Q8BGM5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Best2Q8BGM5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Best2Q8BGM5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Best2Q8BGM5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.02■□□□□ 0.8
Best2Q8BGM5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Best2Q8BGM5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.02■□□□□ 0.8
Best2Q8BGM5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Best2Q8BGM5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Best2Q8BGM5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Best2Q8BGM5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Best2Q8BGM5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Best2Q8BGM5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Best2Q8BGM5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.01■□□□□ 0.79
Best2Q8BGM5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Best2Q8BGM5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Best2Q8BGM5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Best2Q8BGM5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Best2Q8BGM5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Best2Q8BGM5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20■□□□□ 0.79
Best2Q8BGM5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20■□□□□ 0.79
Best2Q8BGM5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best2Q8BGM5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Best2Q8BGM5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms