Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Gm40881-201ENSMUST00000223397 166 ntBASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.04■□□□□ 0.8
Srrm3Q80WV7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Srrm3Q80WV7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Srrm3Q80WV7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Srrm3Q80WV7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Srrm3Q80WV7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Srrm3Q80WV7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Srrm3Q80WV7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Srrm3Q80WV7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20■□□□□ 0.79
Srrm3Q80WV7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20■□□□□ 0.79
Srrm3Q80WV7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.99■□□□□ 0.79
Srrm3Q80WV7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Srrm3Q80WV7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms