Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan18Q80WR1 Gm7514-201ENSMUST00000209475 934 ntBASIC20.6■□□□□ 0.89
Tspan18Q80WR1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Tspan18Q80WR1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan18Q80WR1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan18Q80WR1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tspan18Q80WR1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Gm37179-201ENSMUST00000194862 823 ntBASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tspan18Q80WR1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tspan18Q80WR1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan18Q80WR1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan18Q80WR1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan18Q80WR1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan18Q80WR1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan18Q80WR1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan18Q80WR1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan18Q80WR1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan18Q80WR1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan18Q80WR1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan18Q80WR1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan18Q80WR1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan18Q80WR1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tspan18Q80WR1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.54■□□□□ 0.88
Tspan18Q80WR1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.54■□□□□ 0.88
Tspan18Q80WR1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan18Q80WR1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan18Q80WR1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan18Q80WR1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tspan18Q80WR1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Gm12933-201ENSMUST00000120203 872 ntBASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tspan18Q80WR1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Tspan18Q80WR1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Tspan18Q80WR1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms