Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Csmd3Q80T79 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Csmd3Q80T79 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Csmd3Q80T79 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Gm6277-202ENSMUST00000224036 2779 ntBASIC13.4□□□□□ -0.26
Csmd3Q80T79 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Mir1199-201ENSMUST00000117015 119 ntBASIC13.4□□□□□ -0.26
Csmd3Q80T79 Gm11643-201ENSMUST00000119578 864 ntBASIC13.4□□□□□ -0.26
Csmd3Q80T79 Gm6576-201ENSMUST00000169678 883 ntBASIC13.4□□□□□ -0.26
Csmd3Q80T79 Dio3-201ENSMUST00000097228 1449 ntBASIC13.4□□□□□ -0.26
Csmd3Q80T79 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.4□□□□□ -0.26
Csmd3Q80T79 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Csmd3Q80T79 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Csmd3Q80T79 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.39□□□□□ -0.27
Csmd3Q80T79 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Csmd3Q80T79 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Csmd3Q80T79 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Mir5122-201ENSMUST00000175004 89 ntBASIC13.37□□□□□ -0.27
Csmd3Q80T79 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.37□□□□□ -0.27
Csmd3Q80T79 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Gm11249-201ENSMUST00000117071 859 ntBASIC13.36□□□□□ -0.27
Csmd3Q80T79 Gm6433-201ENSMUST00000118634 875 ntBASIC13.36□□□□□ -0.27
Csmd3Q80T79 Gm10698-201ENSMUST00000182663 604 ntBASIC13.36□□□□□ -0.27
Csmd3Q80T79 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.36□□□□□ -0.27
Csmd3Q80T79 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Csmd3Q80T79 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.36□□□□□ -0.27
Csmd3Q80T79 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms