Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ush1gQ80T11 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ush1gQ80T11 Nespas-201ENSMUST00000143738 1083 ntBASIC21.14■□□□□ 0.97
Ush1gQ80T11 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.14■□□□□ 0.97
Ush1gQ80T11 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.14■□□□□ 0.97
Ush1gQ80T11 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ush1gQ80T11 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ush1gQ80T11 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ush1gQ80T11 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ush1gQ80T11 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ush1gQ80T11 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ush1gQ80T11 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.13■□□□□ 0.97
Ush1gQ80T11 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ush1gQ80T11 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ush1gQ80T11 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ush1gQ80T11 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ush1gQ80T11 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ush1gQ80T11 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ush1gQ80T11 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.1■□□□□ 0.97
Ush1gQ80T11 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ush1gQ80T11 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Ush1gQ80T11 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.09■□□□□ 0.97
Ush1gQ80T11 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ush1gQ80T11 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ush1gQ80T11 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ush1gQ80T11 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.08■□□□□ 0.97
Ush1gQ80T11 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ush1gQ80T11 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ush1gQ80T11 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.08■□□□□ 0.96
Ush1gQ80T11 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ush1gQ80T11 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ush1gQ80T11 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.07■□□□□ 0.96
Ush1gQ80T11 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.07■□□□□ 0.96
Ush1gQ80T11 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.06■□□□□ 0.96
Ush1gQ80T11 AA386476-201ENSMUST00000098781 1665 ntBASIC21.06■□□□□ 0.96
Ush1gQ80T11 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.06■□□□□ 0.96
Ush1gQ80T11 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ush1gQ80T11 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ush1gQ80T11 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ush1gQ80T11 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ush1gQ80T11 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ush1gQ80T11 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ush1gQ80T11 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ush1gQ80T11 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms