Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.76■□□□□ 0.43
Pif1Q80SX8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pif1Q80SX8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pif1Q80SX8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pif1Q80SX8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pif1Q80SX8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.75■□□□□ 0.43
Pif1Q80SX8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.75■□□□□ 0.43
Pif1Q80SX8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pif1Q80SX8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Pif1Q80SX8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pif1Q80SX8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pif1Q80SX8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Pif1Q80SX8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pif1Q80SX8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.73■□□□□ 0.43
Pif1Q80SX8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pif1Q80SX8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pif1Q80SX8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pif1Q80SX8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.72■□□□□ 0.43
Pif1Q80SX8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.72■□□□□ 0.43
Pif1Q80SX8 Gm4968-201ENSMUST00000071458 858 ntBASIC17.72■□□□□ 0.43
Pif1Q80SX8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.72■□□□□ 0.43
Pif1Q80SX8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pif1Q80SX8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pif1Q80SX8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.71■□□□□ 0.43
Pif1Q80SX8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Gm13146-201ENSMUST00000118508 780 ntBASIC17.71■□□□□ 0.43
Pif1Q80SX8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pif1Q80SX8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pif1Q80SX8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.7■□□□□ 0.42
Pif1Q80SX8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.7■□□□□ 0.42
Pif1Q80SX8 Gm38205-201ENSMUST00000192243 258 ntBASIC17.7■□□□□ 0.42
Pif1Q80SX8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.7■□□□□ 0.42
Pif1Q80SX8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pif1Q80SX8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Gm6365-201ENSMUST00000054711 744 ntBASIC17.69■□□□□ 0.42
Pif1Q80SX8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pif1Q80SX8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pif1Q80SX8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms